Журнал микробиологии, эпидемиологии и иммунобиологии. 2020; 97: 594-603
Значение мембранных фосфолипидов в реализации защитных стратегий бактерий
Андрюков Б. Г., Ляпун И. Н., Матосова Е. В.
https://doi.org/10.36233/0372-9311-2020-97-6-10Аннотация
Список литературы
1. Sohlenkamp C., Geiger O. Bacterial membrane lipids: diversity in structures and pathways. FEMS Microbiol. Rev. 2016; 40(1): 133–59. https://doi.org/10.1093/femsre/fuv008
2. Dörr T., Moynihan P.J., Mayer C. Editorial: bacterial cell wall structure and dynamics. Front. Microbiol. 2019; 10: 2051. https://doi.org/10.3389/fmicb.2019.02051
3. Abellón-Ruiz J., Kaptan S.S., Baslé A., Claudi B., Bumann D., Kleinekathöfer U., et al. Structural basis for maintenance of bacterial outer membrane lipid asymmetry. Nat. Microbiol. 2017; 2(12): 1616–23. https://doi.org/10.1038/s41564-017-0046-x
4. Nicolson G.L. The Fluid-Mosaic Model of Membrane Structure: still relevant to understanding the structure, function and dynamics of biological membranes after more than 40 years. Biochim. Biophys. Acta. 2014; 1838(6): 1451–66. https://doi.org/10.1016/j.bbamem.2013.10.019
5. Slavetinsky C., Kuhn S., Peschel A. Bacterial aminoacyl phospholipids – biosynthesis and role in basic cellular processes and pathogenicity. Biochim. Biophys. Acta Mol. Cell Biol. Lipids. 2017; 1862(11): 1310–8. https://doi.org/10.1016/j.bbalip.2016.11.013
6. Barák I., Muchová K. The role of lipid domains in bacterial cell processes. Int. J. Mol. Sci. 2013; 14(2): 4050–65. https://doi.org/10.3390/ijms14024050
7. Dalebroux Z.D. Cues from the membrane: bacterial glycerophospholipids. J. Bacteriol. 2017; 199(13): e00136-17. https://doi.org/10.1128/JB.00136-17
8. Rowlett V.W., Mallampalli V.K.P.S., Karlstaedt A., Dowhan W., Taegtmeyer H., Margolin W., et al. Impact of membrane phospholipid alterations in Escherichia coli on cellular function and bacterial stress adaptation. J. Bacteriol. 2017; 199(13): e00849-16. https://doi.org/10.1128/JB.00849-16
9. Vitrac H., Mallampalli V.K.P.S., Dowhan W. Importance of phosphorylation/dephosphorylation cycles on lipid-dependent modulation of membrane protein topology by posttranslational phosphorylation. J. Biol. Chem. 2019; 294(49): 18853–62. https://doi.org/10.1074/jbc.RA119.010785
10. Bishop R.E. Phospholipid middle management. Nat. Microbiol. 2019; 4(10): 1608–9. https://doi.org/10.1038/s41564-019-0570-y
11. Sastre D.E., Basso LG.M., Trastoy B., Cifuente J.O., Contreras X., Gueiros-Filho F., et al. Membrane fluidity adjusts the insertion of the transacylase PlsX to regulate phospholipid biosynthesis in Gram-positive bacteria. J. Biol. Chem. 2020; 295(7): 2136–47. https://doi.org/10.1074/jbc.RA119.011122
12. Exterkate M., Caforio A., Stuart M.C.A., Driessen A.J.M. Growing membranes in vitro by continuous phospholipid biosynthesis from free fatty acids. ACS Synth. Biol. 2018; 7(1): 153–65. https://doi.org/10.1021/acssynbio.7b00265
13. Tang Y., Xia H., Li D. Membrane phospholipid biosynthesis in bacteria. In: Cao Y., eds. Advances in Membrane Proteins. Singapore: Springer; 2018: 77–119. https://doi.org/10.1007/978-981-13-0532-0_4
14. Danne L., Aktas M., Unger A., Linke W.A., Erdmann R., Narberhaus F. Membrane remodeling by a bacterial phospholipid-methylating enzyme. mBio. 2017; 8(1): e02082-16. https://doi.org/10.1128/mBio.02082-16
15. Parsons J.B., Rock C.O. Bacterial lipids: metabolism and membrane homeostasis. Prog. Lipid Res. 2013; 52(3): 249–76. https://doi.org/10.1016/j.plipres.2013.02.002
16. Shrivastava R., Jiang X., Chng S.S. Outer membrane lipid homeostasis via retrograde phospholipid transport in Escherichia coli. Mol. Microbiol. 2017; 106(3): 395–408. https://doi.org/10.1111/mmi.13772
17. Coleman G.A., Pancost R.D., Williams T.A. Investigating the origins of membrane phospholipid biosynthesis genes using outgroup-free rooting. Genome Biol. Evol. 2019; 11(3): 883–98. https://doi.org/10.1093/gbe/evz034
18. Tan Z., Khakbaz P., Chen Y., Lombardo J., Yoon J.M., Shanks J.V., et al. Engineering Escherichia coli membrane phospholipid head distribution improves tolerance and production of biorenewables. Metab. Eng. 2017; 44: 1–12. https://doi.org/10.1016/j.ymben.2017
19. Dowhan W. Understanding phospholipid function: why are there so many lipids? J. Biol. Chem. 2017; 292(26): 10755–66. https://doi.org/10.1074/jbc.X117.794891
20. Robertson R.M., Yao J., Gajewski S., Kumar G., Martin E.W., Rock C.O., et al. A two-helix motif positions the active site of lysophosphatidic acid acyltransferase for catalysis within the membrane bilayer. Nat. Struct. Mol. Biol. 2017; 24(8): 666–71. https://doi.org/10.1038/nsmb.3436
21. Lin T.Y., Gross W.S., Auer G.K., Weibel D.B. Cardiolipin alters Rhodobacter sphaeroides cell shape by affecting peptidoglycan precursor biosynthesis. mBio. 2019; 10(1): e02401-18. https://doi.org/10.1128/mBio.02401-18
22. Tan B.K., Bogdanov M., Zhao J., Dowhan W., Raetz C.R.H., Guan Z. Discovery of a novel cardiolipin synthase in Escherichia coli utilizing phosphatidylethanolamine and phosphatidylglycerol as substrates. Proc. Natl. Acad. Sci. USA. 2012; 109(41): 16504–9. https://doi.org/10.1073/pnas.1212797109
23. El Khoury M., Swain J., Sautrey G., Zimmermann L., Van Der Smissen P., Décout J.L., et al. Targeting bacterial cardiolipin enriched microdomains: an antimicrobial strategy used by amphiphilic aminoglycoside antibiotics. Sci. Rep. 2017; 7(1): 10697. https://doi.org/10.1038/s41598-017-10543-3
24. Mileykovskaya E., Ryan A.C., Mo X., Lin C.C., Khalaf K.I., Dowhan W., et al. Phosphatidic acid and N-acylphosphatidylethanolamine form membrane domains in Escherichia coli mutant lacking cardiolipin and phosphatidylglycerol. J. Biol. Chem. 2009; 284(5): 2990–3000. https://doi.org/10.1074/jbc.M805189200
25. Pogmore A.R., Seistrup K.H., Strahl H. The Gram-positive model organism Bacillus subtilis does not form microscopically detectable cardiolipin-specific lipid domains. Microbiology. 2018; 164(4): 475–82. https://doi.org/10.1099/mic.0.000639
26. Giles D.K., Hankins J.V., Guan Z., Trent M.S. Remodelling of the Vibrio cholerae membrane by incorporation of exogenous fatty acids from host and aquatic environments. Mol. Microbiol. 2011; 79(3): 716–28. https://doi.org/10.1111/j.1365-2958.2010.07476.x
27. Bramkamp M., Lopez D. Exploring the existence of lipid rafts in bacteria. Microbiol. Mol. Biol. Rev. 2015; 79(1): 81–100. https://doi.org/10.1128/MMBR.00036-14
28. Epand R.M., Epand R.F. Lipid domains in bacterial membranes and the action of antimicrobial agents. Biochim. Biophys. Acta. 2009; 1788(1): 289–94. https://doi.org/10.1016/j.bbamem.2008.08.023
29. Matsuzaki K., ed. Antimicrobial Peptides: Basics for Clinical Application. Kyoto: Springer; 2019.
30. Ursell T.S., Klug W.S., Phillips R. Morphology and interaction between lipid domains. Proc. Natl. Acad. Sci. USA. 2009; 106(32): 13301–6. https://doi.org/10.1073/pnas.0903825106
Journal of microbiology, epidemiology and immunobiology. 2020; 97: 594-603
The role of membrane phospholipids in the implementation of protective strategies of bacteria
Andryukov B. G., Lyapun I. N., Matosova E. V.
https://doi.org/10.36233/0372-9311-2020-97-6-10Abstract
References
1. Sohlenkamp C., Geiger O. Bacterial membrane lipids: diversity in structures and pathways. FEMS Microbiol. Rev. 2016; 40(1): 133–59. https://doi.org/10.1093/femsre/fuv008
2. Dörr T., Moynihan P.J., Mayer C. Editorial: bacterial cell wall structure and dynamics. Front. Microbiol. 2019; 10: 2051. https://doi.org/10.3389/fmicb.2019.02051
3. Abellón-Ruiz J., Kaptan S.S., Baslé A., Claudi B., Bumann D., Kleinekathöfer U., et al. Structural basis for maintenance of bacterial outer membrane lipid asymmetry. Nat. Microbiol. 2017; 2(12): 1616–23. https://doi.org/10.1038/s41564-017-0046-x
4. Nicolson G.L. The Fluid-Mosaic Model of Membrane Structure: still relevant to understanding the structure, function and dynamics of biological membranes after more than 40 years. Biochim. Biophys. Acta. 2014; 1838(6): 1451–66. https://doi.org/10.1016/j.bbamem.2013.10.019
5. Slavetinsky C., Kuhn S., Peschel A. Bacterial aminoacyl phospholipids – biosynthesis and role in basic cellular processes and pathogenicity. Biochim. Biophys. Acta Mol. Cell Biol. Lipids. 2017; 1862(11): 1310–8. https://doi.org/10.1016/j.bbalip.2016.11.013
6. Barák I., Muchová K. The role of lipid domains in bacterial cell processes. Int. J. Mol. Sci. 2013; 14(2): 4050–65. https://doi.org/10.3390/ijms14024050
7. Dalebroux Z.D. Cues from the membrane: bacterial glycerophospholipids. J. Bacteriol. 2017; 199(13): e00136-17. https://doi.org/10.1128/JB.00136-17
8. Rowlett V.W., Mallampalli V.K.P.S., Karlstaedt A., Dowhan W., Taegtmeyer H., Margolin W., et al. Impact of membrane phospholipid alterations in Escherichia coli on cellular function and bacterial stress adaptation. J. Bacteriol. 2017; 199(13): e00849-16. https://doi.org/10.1128/JB.00849-16
9. Vitrac H., Mallampalli V.K.P.S., Dowhan W. Importance of phosphorylation/dephosphorylation cycles on lipid-dependent modulation of membrane protein topology by posttranslational phosphorylation. J. Biol. Chem. 2019; 294(49): 18853–62. https://doi.org/10.1074/jbc.RA119.010785
10. Bishop R.E. Phospholipid middle management. Nat. Microbiol. 2019; 4(10): 1608–9. https://doi.org/10.1038/s41564-019-0570-y
11. Sastre D.E., Basso LG.M., Trastoy B., Cifuente J.O., Contreras X., Gueiros-Filho F., et al. Membrane fluidity adjusts the insertion of the transacylase PlsX to regulate phospholipid biosynthesis in Gram-positive bacteria. J. Biol. Chem. 2020; 295(7): 2136–47. https://doi.org/10.1074/jbc.RA119.011122
12. Exterkate M., Caforio A., Stuart M.C.A., Driessen A.J.M. Growing membranes in vitro by continuous phospholipid biosynthesis from free fatty acids. ACS Synth. Biol. 2018; 7(1): 153–65. https://doi.org/10.1021/acssynbio.7b00265
13. Tang Y., Xia H., Li D. Membrane phospholipid biosynthesis in bacteria. In: Cao Y., eds. Advances in Membrane Proteins. Singapore: Springer; 2018: 77–119. https://doi.org/10.1007/978-981-13-0532-0_4
14. Danne L., Aktas M., Unger A., Linke W.A., Erdmann R., Narberhaus F. Membrane remodeling by a bacterial phospholipid-methylating enzyme. mBio. 2017; 8(1): e02082-16. https://doi.org/10.1128/mBio.02082-16
15. Parsons J.B., Rock C.O. Bacterial lipids: metabolism and membrane homeostasis. Prog. Lipid Res. 2013; 52(3): 249–76. https://doi.org/10.1016/j.plipres.2013.02.002
16. Shrivastava R., Jiang X., Chng S.S. Outer membrane lipid homeostasis via retrograde phospholipid transport in Escherichia coli. Mol. Microbiol. 2017; 106(3): 395–408. https://doi.org/10.1111/mmi.13772
17. Coleman G.A., Pancost R.D., Williams T.A. Investigating the origins of membrane phospholipid biosynthesis genes using outgroup-free rooting. Genome Biol. Evol. 2019; 11(3): 883–98. https://doi.org/10.1093/gbe/evz034
18. Tan Z., Khakbaz P., Chen Y., Lombardo J., Yoon J.M., Shanks J.V., et al. Engineering Escherichia coli membrane phospholipid head distribution improves tolerance and production of biorenewables. Metab. Eng. 2017; 44: 1–12. https://doi.org/10.1016/j.ymben.2017
19. Dowhan W. Understanding phospholipid function: why are there so many lipids? J. Biol. Chem. 2017; 292(26): 10755–66. https://doi.org/10.1074/jbc.X117.794891
20. Robertson R.M., Yao J., Gajewski S., Kumar G., Martin E.W., Rock C.O., et al. A two-helix motif positions the active site of lysophosphatidic acid acyltransferase for catalysis within the membrane bilayer. Nat. Struct. Mol. Biol. 2017; 24(8): 666–71. https://doi.org/10.1038/nsmb.3436
21. Lin T.Y., Gross W.S., Auer G.K., Weibel D.B. Cardiolipin alters Rhodobacter sphaeroides cell shape by affecting peptidoglycan precursor biosynthesis. mBio. 2019; 10(1): e02401-18. https://doi.org/10.1128/mBio.02401-18
22. Tan B.K., Bogdanov M., Zhao J., Dowhan W., Raetz C.R.H., Guan Z. Discovery of a novel cardiolipin synthase in Escherichia coli utilizing phosphatidylethanolamine and phosphatidylglycerol as substrates. Proc. Natl. Acad. Sci. USA. 2012; 109(41): 16504–9. https://doi.org/10.1073/pnas.1212797109
23. El Khoury M., Swain J., Sautrey G., Zimmermann L., Van Der Smissen P., Décout J.L., et al. Targeting bacterial cardiolipin enriched microdomains: an antimicrobial strategy used by amphiphilic aminoglycoside antibiotics. Sci. Rep. 2017; 7(1): 10697. https://doi.org/10.1038/s41598-017-10543-3
24. Mileykovskaya E., Ryan A.C., Mo X., Lin C.C., Khalaf K.I., Dowhan W., et al. Phosphatidic acid and N-acylphosphatidylethanolamine form membrane domains in Escherichia coli mutant lacking cardiolipin and phosphatidylglycerol. J. Biol. Chem. 2009; 284(5): 2990–3000. https://doi.org/10.1074/jbc.M805189200
25. Pogmore A.R., Seistrup K.H., Strahl H. The Gram-positive model organism Bacillus subtilis does not form microscopically detectable cardiolipin-specific lipid domains. Microbiology. 2018; 164(4): 475–82. https://doi.org/10.1099/mic.0.000639
26. Giles D.K., Hankins J.V., Guan Z., Trent M.S. Remodelling of the Vibrio cholerae membrane by incorporation of exogenous fatty acids from host and aquatic environments. Mol. Microbiol. 2011; 79(3): 716–28. https://doi.org/10.1111/j.1365-2958.2010.07476.x
27. Bramkamp M., Lopez D. Exploring the existence of lipid rafts in bacteria. Microbiol. Mol. Biol. Rev. 2015; 79(1): 81–100. https://doi.org/10.1128/MMBR.00036-14
28. Epand R.M., Epand R.F. Lipid domains in bacterial membranes and the action of antimicrobial agents. Biochim. Biophys. Acta. 2009; 1788(1): 289–94. https://doi.org/10.1016/j.bbamem.2008.08.023
29. Matsuzaki K., ed. Antimicrobial Peptides: Basics for Clinical Application. Kyoto: Springer; 2019.
30. Ursell T.S., Klug W.S., Phillips R. Morphology and interaction between lipid domains. Proc. Natl. Acad. Sci. USA. 2009; 106(32): 13301–6. https://doi.org/10.1073/pnas.0903825106
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